New strategies generate more accurate pediatric brain organoids

The cortex and brain tumors

Multiple childhood brain tumors, like cortical gliomas, arise from the cortex, the outer layer of the largest part of the brain, and the brain’s most expanded structure. Research into a better understanding of how brain tumors arise and develop could help researchers in finding possible targets for treatment. To study the development of the brain and brain tumors, scientists use organoids: 3D mini-organs or mini-tumors grown in the lab. In the current study, researchers at the Hubrecht Institute and Princess Máxima Center created a new cortex organoid that better represents the human brain.

More accurate models

The current study was led by dr. Benedetta Artegiani, research group leader at the Máxima Center and Delilah Hendriks, Oncode-researcher in the Organoid group at the Hubrecht Institute and affiliated group leader at the Máxima Center and published today in Nature Communications. The new cortex organoid that the researchers generated more closely represents the human brain in multiple aspects: their shape, their architectural organization and several properties of their cells.

Recapitulate aspects of the developing human brain

The formation of the human brain starts with a single structure, called the neural tube, which is composed of a specific tissue, called the neuroepithelium. The cells in this structure are then slowly ‘instructed’ to generate all the different cells that are present in the various parts of the brain.

Artegiani says: ‘The brain organoids that already existed generally consist of several developmental structures that act like ‘independent’ small developing brains within one organoid. For a long time, researchers have tried to create organoids that do not have these multiple structures, to diminish variability, increase reproducibility, better recreate the brain’s cellular identities and ultimately to recapitulate brain development more closely. We have succeeded in this effort, by creating the current organoids that are composed of a self-organizing, single developing neuroepithelium.’

Anna Pagliaro, PhD student and first author of the study: ’We tried to mimic, in a dish, gradients of molecules that are present during brain development over time. This resulted in mini-brains that are very different in shape and structure than we used to work with. These organoids overall better resemble the early stages of brain development. It is quite impressive to see how much the shape of these organoids can influence all the different cells that form them, in terms of their shape, architecture and also identity.’

Mimicking mechanisms of the human brain

The researchers named the new mini-brains Expanded Neuroepithelium Organoids (ENOs) for the developmental tissue used to grow them. To generate them, they made a small but important change. Hendriks: ’Cells in the brain are instructed to acquire their identity through molecules that act slowly in time, the so-called temporal gradients. This is exactly what we tried to mimic. To our surprise, it was enough to just provide one of the molecules (TGF-b) slowly step-by-step to generate brain organoids. This tiny change had an enormous impact and allowed us to generate organoids with a shape and an identity more similar to the human brain.’

The next steps

Pediatric brain tumors may derive from unusual or mistaken developmental process and their study could benefit from these new models that better recapitulate early embryonic developmental mechanisms. The signaling molecule that the researchers used to make the organoids is often altered in childhood brain tumors, also suggesting that the onset of cancer in young children could be linked with changes in brain development. Now that the researchers understand that temporal gradients are of great importance to generate more accurate organoids, this study paves the way to develop brain organoids more and more similar to the developing human brain.

Artegiani: ‘We can use these novel organoids as a basis to model pediatric brain tumors, and study more in depth the role of TFG-b signaling in this process. Our research marks an essential step to create proper models to study pediatric brain cancer. If such a small change of a signaling molecule has such a great impact on brain organoid models, we can only start to imagine which effects small alterations during development can have for how pediatric brain tumors can develop.’

3D video of brain organoid showing the stem cells in yellow and neurons in magenta. Credit: Anna Pagliaro, Delilah Hendriks and Benedetta Artegiani, copyright Prinses Máxima Center for pediatric oncology.

Publication

Temporal morphogen gradient-driven neural induction shapes single expanded neuroepithelium brain organoids with enhanced cortical identity. Anna Pagliaro, Roxy Finger, Iris Zoutendijk, Saskia Bunschuh, Hans Clevers, Delilah Hendriks*, Benedetta Artegiani*. Nature Communications 2023.
*These authors jointly supervised this research